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P. troglodytes Gene: TRIM67 - ENSPTRG00000002104 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000002104
NameTRIM67
Descriptiontripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
OrganismPan troglodytes (chimpanzee)
Synonym(s)tnl
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.38e3
  • 5.38e3
  • 1.03e4
  • 1.11e4
78.35
  • 78.35
  • 58.62
  • 55.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.95e3
  • 7.95e3
  • 1.19e4
  • 1.41e4
  • 1.43e4
  • 1.46e4
  • 1.57e4
68.01
  • 68.01
  • 52.24
  • 43.44
  • 42.30
  • 41.12
  • 36.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.77e3
  • 9.77e3
  • 1.04e4
  • 1.14e4
60.69
  • 60.69
  • 58.33
  • 53.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.39e4
  • 1.48e4
  • 1.53e4
  • 1.53e4
58.80
  • 58.80
  • 43.87
  • 40.27
  • 38.60
  • 38.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
43.79
  • 43.79
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
43.24
  • 43.24
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
40.11
  • 40.11
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 2.03e4
39.26
  • 39.26
  • 18.42
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
36.13
  • 36.13
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
28.35
  • 28.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000002104.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSPTRG00000002104.

Cross-references

EnsemblENSPTRG00000002104 (TRIM67)
HGNCHGNC:31859 (TRIM67)
EMBLAACZ03005458, AACZ03005459, AACZ03005460
Uniprot/SPTREMBLH2Q1C3, H2Q1C3_PANTR

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