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P. paniscus Gene: PGBD2 - ENSPTRG00000002227 - Pan paniscus (bonobo)

General information

Ensembl IDENSPTRG00000002227
NamePGBD2
DescriptionpiggyBac transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:19399]
OrganismPan paniscus (bonobo)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
4.76e3
  • 4.76e3
  • 6.14e3
77.09
  • 77.09
  • 70.44
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.36e3
  • 5.36e3
74.19
  • 74.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
5.73e3
  • 5.73e3
  • 8.05e3
72.40
  • 72.40
  • 61.26
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.13e3
  • 6.13e3
  • 6.21e3
70.50
  • 70.50
  • 70.09
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
6.94e3
  • 6.94e3
66.59
  • 66.59
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
7.82e3
  • 7.82e3
  • 8.31e3
62.32
  • 62.32
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
9.07e3
  • 9.07e3
  • 1.08e4
56.32
  • 56.32
  • 48.08
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

HGNCHGNC:19399 (PGBD2)
EMBLGABD01006865, GABF01004510
Uniprot/SPTREMBLH2Q1I5, H2Q1I5_PANTR

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