We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

P. troglodytes Gene: IRF7 - ENSPTRG00000003126 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000003126
NameIRF7
Descriptioninterferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
  • 1.10e4
90.03
  • 90.03
  • 55.79
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
4.68e3
  • 4.68e3
81.15
  • 81.15
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
4.91e3
  • 4.91e3
80.24
  • 80.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
4.95e3
  • 4.95e3
  • 5.74e3
  • 9.66e3
  • 9.97e3
80.08
  • 80.08
  • 76.91
  • 61.13
  • 59.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
5.46e3
  • 5.46e3
78.01
  • 78.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.99e3
  • 5.99e3
  • 6.83e3
  • 9.27e3
  • 1.05e4
75.88
  • 75.88
  • 72.50
  • 62.69
  • 57.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
7.22e3
  • 7.22e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.39e3
  • 7.39e3
  • 1.06e4
  • 1.18e4
70.26
  • 70.26
  • 57.50
  • 52.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.48e3
  • 8.48e3
65.87
  • 65.87
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
59.10
  • 59.10
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.11e4
  • 1.17e4
  • 1.17e4
  • 1.32e4
58.40
  • 58.40
  • 55.46
  • 52.97
  • 52.82
  • 46.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
  • 1.28e4
  • 1.39e4
56.66
  • 56.66
  • 48.33
  • 44.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.10e4
  • 1.10e4
  • 1.18e4
  • 1.19e4
  • 1.28e4
  • 1.30e4
  • 1.32e4
55.67
  • 55.67
  • 52.69
  • 52.15
  • 48.50
  • 47.77
  • 46.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.14e4
  • 1.14e4
  • 1.25e4
53.98
  • 53.98
  • 49.70
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
52.81
  • 52.81
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
50.98
  • 50.98
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.49
  • 50.49
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
49.06
  • 49.06
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
46.18
  • 46.18
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
45.15
  • 45.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000003126.

Cross-references

EnsemblENSPTRG00000003126 (IRF7)
HGNCHGNC:6122 (IRF7)
EMBLAACZ03083627, AACZ03083628
Uniprot/SPTREMBLH2Q2V3, H2Q2V3_PANTR

Do not show this banner again