P. troglodytes Gene: FANCF - ENSPTRG00000003445 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000003445
NameFANCF
DescriptionFanconi anemia complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
OrganismPan troglodytes (chimpanzee)
Synonym(s)faf
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
5.23e3
  • 5.23e3
  • 6.34e3
78.95
  • 78.95
  • 74.47
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
9.45e3
  • 9.45e3
  • 1.05e4
  • 1.14e4
  • 1.20e4
61.95
  • 61.95
  • 57.56
  • 53.98
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.18e4
  • 1.23e4
59.58
  • 59.58
  • 52.62
  • 50.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.03e4
  • 1.08e4
  • 1.10e4
  • 1.20e4
59.35
  • 59.35
  • 58.61
  • 56.57
  • 55.57
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
  • 1.09e4
  • 1.15e4
  • 1.17e4
  • 1.20e4
  • 1.22e4
59.22
  • 59.22
  • 56.06
  • 53.67
  • 53.07
  • 51.64
  • 51.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
59.19
  • 59.19
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
58.67
  • 58.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.15e4
  • 1.26e4
  • 1.38e4
58.51
  • 58.51
  • 53.81
  • 49.26
  • 44.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.40e4
57.77
  • 57.77
  • 43.70
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
57.04
  • 57.04
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
55.37
  • 55.37
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
53.43
  • 53.43
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
51.75
  • 51.75
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.25e4
  • 1.28e4
51.48
  • 51.48
  • 49.87
  • 48.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
49.89
  • 49.89
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
37.28
  • 37.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae1 species1 geneCompare expression
Catarrhini2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000003445.

Cross-references

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