P. troglodytes Gene: RIN1 - ENSPTRG00000003919 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000003919
NameRIN1
DescriptionRas and Rab interactor 1 [Source:HGNC Symbol;Acc:HGNC:18749]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
4.55e3
  • 4.55e3
  • 6.24e3
  • 6.52e3
  • 8.38e3
  • 9.49e3
81.71
  • 81.71
  • 74.87
  • 73.75
  • 66.26
  • 61.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.86e3
  • 4.86e3
  • 6.84e3
  • 1.17e4
80.46
  • 80.46
  • 72.48
  • 52.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.34e3
  • 6.34e3
  • 7.49e3
  • 1.20e4
74.47
  • 74.47
  • 69.85
  • 51.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.44e3
  • 7.44e3
  • 8.09e3
  • 8.16e3
  • 9.04e3
  • 9.13e3
  • 9.28e3
70.06
  • 70.06
  • 67.42
  • 67.17
  • 63.63
  • 63.27
  • 62.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
8.60e3
  • 8.60e3
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
8.66e3
  • 8.66e3
65.14
  • 65.14
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
9.73e3
  • 9.73e3
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
55.54
  • 55.54
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
54.31
  • 54.31
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
  • 1.27e4
  • 1.35e4
  • 1.62e4
52.84
  • 52.84
  • 48.76
  • 45.78
  • 34.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.35e4
  • 1.35e4
48.78
  • 48.78
  • 45.55
  • 45.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
46.17
  • 46.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.42e4
  • 1.42e4
  • 1.46e4
42.92
  • 42.92
  • 41.31
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
42.18
  • 42.18
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.86e4
40.95
  • 40.95
  • 25.07
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000003919.

Cross-references

EnsemblENSPTRG00000003919 (RIN1)
HGNCHGNC:18749 (RIN1)
EMBLAACZ03082581, GABC01008820, GABE01002584, GABF01001879
Uniprot/SPTREMBLH2R578, H2R578_PANTR

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