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P. troglodytes Gene: PICALM - ENSPTRG00000004141 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000004141
NamePICALM
Descriptionphosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
OrganismPan troglodytes (chimpanzee)
Synonym(s)calm, clth
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
555
  • 555
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
720
  • 720
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
742
  • 742
97.02
  • 97.02
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
912
  • 912
96.33
  • 96.33
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
916
  • 916
96.32
  • 96.32
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
964
  • 964
96.12
  • 96.12
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.07e3
  • 1.07e3
  • 1.63e3
95.72
  • 95.72
  • 93.43
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.10e3
  • 1.10e3
  • 1.83e3
  • 3.41e3
  • 3.92e3
95.57
  • 95.57
  • 92.62
  • 86.26
  • 84.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
94.98
  • 94.98
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.27e3
  • 1.27e3
  • 1.64e3
94.88
  • 94.88
  • 93.42
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.30e3
  • 1.30e3
94.77
  • 94.77
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.52e3
  • 1.52e3
  • 2.55e3
  • 2.58e3
  • 2.65e3
  • 2.70e3
93.89
  • 93.89
  • 89.73
  • 89.63
  • 89.33
  • 89.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.61e3
  • 1.61e3
93.53
  • 93.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.62e3
  • 1.62e3
  • 1.75e3
  • 2.08e3
  • 3.23e3
93.50
  • 93.50
  • 92.97
  • 91.63
  • 87.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
1.67e3
  • 1.67e3
  • 1.93e3
  • 2.10e3
  • 2.15e3
  • 2.39e3
  • 3.20e3
93.29
  • 93.29
  • 92.25
  • 91.56
  • 91.33
  • 90.37
  • 87.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.74e3
  • 1.74e3
93.00
  • 93.00
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.75e3
  • 1.75e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.80e3
  • 1.80e3
92.77
  • 92.77
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.82e3
  • 1.82e3
  • 2.15e3
  • 3.63e3
92.69
  • 92.69
  • 91.36
  • 85.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.91e3
  • 1.91e3
  • 3.25e3
  • 3.99e3
92.33
  • 92.33
  • 86.91
  • 83.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
  • 3.18e3
91.66
  • 91.66
  • 87.19
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.07e3
  • 2.07e3
91.66
  • 91.66
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.12e3
  • 2.12e3
91.46
  • 91.46
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.32e3
  • 2.32e3
90.66
  • 90.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000004141.

Cross-references

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