P. troglodytes Gene: CD9 - ENSPTRG00000004567 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000004567
NameCD9
DescriptionCD9 molecule [Source:HGNC Symbol;Acc:HGNC:1709]
OrganismPan troglodytes (chimpanzee)
Synonym(s)ba2, mic3, mrp-1, p24, tspan29
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
345
  • 345
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
487
  • 487
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
500
  • 500
  • 1.09e3
97.99
  • 97.99
  • 95.63
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
557
  • 557
97.76
  • 97.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
725
  • 725
97.09
  • 97.09
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.08e3
  • 1.08e3
95.65
  • 95.65
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.12e3
  • 1.12e3
  • 2.99e3
  • 3.31e3
  • 8.79e3
95.50
  • 95.50
  • 87.99
  • 86.70
  • 64.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.18e3
  • 1.18e3
  • 1.47e3
  • 2.09e3
  • 4.24e3
95.26
  • 95.26
  • 94.09
  • 91.59
  • 82.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.36e3
  • 1.36e3
94.55
  • 94.55
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.37e3
  • 1.37e3
  • 1.70e3
  • 2.52e3
  • 2.87e3
  • 4.30e3
  • 4.31e3
94.48
  • 94.48
  • 93.17
  • 89.87
  • 88.46
  • 82.68
  • 82.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.62e3
  • 1.62e3
93.49
  • 93.49
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.65e3
  • 1.65e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.74e3
  • 1.74e3
  • 2.30e3
  • 2.70e3
  • 3.17e3
  • 4.17e3
93.00
  • 93.00
  • 90.73
  • 89.12
  • 87.26
  • 83.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.99e3
  • 1.99e3
  • 3.33e3
  • 3.95e3
92.00
  • 92.00
  • 86.59
  • 84.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
  • 8.35e3
91.89
  • 91.89
  • 66.41
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.22e3
  • 2.22e3
  • 2.45e3
  • 4.03e3
91.07
  • 91.07
  • 90.15
  • 83.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
86.38
  • 86.38
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.94e3
  • 3.94e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
6.22e3
  • 6.22e3
74.96
  • 74.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
7.32e3
  • 7.32e3
70.54
  • 70.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.00e3
  • 8.00e3
  • 1.12e4
67.79
  • 67.79
  • 55.02
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.30e3
  • 8.30e3
66.59
  • 66.59
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
55.05
  • 55.05
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
48.32
  • 48.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000004567.

Cross-references

Do not show this banner again