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P. troglodytes Gene: SRSF9 - ENSPTRG00000005535 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000005535
NameSRSF9
Descriptionserine/arginine-rich splicing factor 9 [Source:HGNC Symbol;Acc:HGNC:10791]
OrganismPan troglodytes (chimpanzee)
Synonym(s)sfrs9, srp30c
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
671
  • 671
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
802
  • 802
  • 924
96.77
  • 96.77
  • 96.28
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
814
  • 814
  • 1.02e3
  • 1.63e3
  • 1.76e3
96.73
  • 96.73
  • 95.91
  • 93.43
  • 92.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
849
  • 849
  • 1.66e3
96.59
  • 96.59
  • 93.33
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
951
  • 951
  • 1.19e3
  • 1.26e3
96.18
  • 96.18
  • 95.23
  • 94.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
986
  • 986
  • 1.25e3
  • 3.26e3
96.03
  • 96.03
  • 94.95
  • 86.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.04e3
  • 1.04e3
95.82
  • 95.82
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.07e3
  • 1.07e3
  • 1.10e3
  • 1.23e3
  • 1.26e3
  • 1.27e3
  • 1.35e3
95.70
  • 95.70
  • 95.57
  • 95.05
  • 94.95
  • 94.87
  • 94.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.10e3
  • 1.10e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.22e3
  • 1.22e3
  • 1.26e3
  • 1.28e3
  • 1.29e3
  • 1.42e3
95.09
  • 95.09
  • 94.92
  • 94.85
  • 94.82
  • 94.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
94.30
  • 94.30
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.82e3
  • 1.82e3
92.68
  • 92.68
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.97e3
  • 1.97e3
92.09
  • 92.09
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
91.67
  • 91.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
  • 2.26e3
  • 2.56e3
  • 3.34e3
91.67
  • 91.67
  • 90.92
  • 89.69
  • 86.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
2.13e3
  • 2.13e3
91.41
  • 91.41
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
2.14e3
  • 2.14e3
91.39
  • 91.39
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
2.25e3
  • 2.25e3
90.96
  • 90.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
2.54e3
  • 2.54e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.61e3
  • 2.61e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
3.35e3
  • 3.35e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.44e3
  • 3.44e3
86.14
  • 86.14
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
5.37e3
  • 5.37e3
78.39
  • 78.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae1 species1 geneCompare expression
Catarrhini2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000005535.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSPTRG00000005535.

Cross-references

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