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P. troglodytes Gene: - ENSPTRG00000005663 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000005663
Name-
Description-
OrganismPan troglodytes (chimpanzee)
Orthologs(s)43 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
7.17e3
  • 7.17e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
7.63e3
  • 7.63e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
8.25e3
  • 8.25e3
  • 8.29e3
  • 1.11e4
  • 1.17e4
66.79
  • 66.79
  • 66.63
  • 55.29
  • 53.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.64e3
  • 8.64e3
  • 1.01e4
  • 1.29e4
65.21
  • 65.21
  • 59.26
  • 47.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
8.73e3
  • 8.73e3
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.79e3
  • 8.79e3
64.61
  • 64.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.86e3
  • 8.86e3
  • 1.11e4
64.33
  • 64.33
  • 55.28
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
9.53e3
  • 9.53e3
  • 1.08e4
61.65
  • 61.65
  • 56.58
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
9.67e3
  • 9.67e3
61.06
  • 61.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.77e3
  • 9.77e3
  • 9.90e3
  • 1.03e4
  • 1.14e4
60.68
  • 60.68
  • 60.14
  • 58.52
  • 54.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.79e3
  • 9.79e3
  • 1.17e4
  • 1.41e4
60.60
  • 60.60
  • 53.06
  • 43.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
  • 1.07e4
60.39
  • 60.39
  • 56.74
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
9.92e3
  • 9.92e3
60.07
  • 60.07
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.00e4
  • 1.00e4
  • 1.10e4
  • 1.13e4
  • 1.14e4
  • 1.21e4
  • 1.24e4
59.76
  • 59.76
  • 55.64
  • 54.48
  • 54.18
  • 51.13
  • 50.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
59.46
  • 59.46
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.13e4
  • 1.16e4
  • 1.20e4
  • 1.23e4
58.75
  • 58.75
  • 54.70
  • 53.42
  • 51.51
  • 50.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
57.33
  • 57.33
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
56.49
  • 56.49
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
56.25
  • 56.25
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
55.76
  • 55.76
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
53.35
  • 53.35
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
51.20
  • 51.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae1 species1 geneCompare expression
Boreoeutheria5 species5 genesCompare expression
Tetrapoda6 species43 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000005663.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda3 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000005663.

Cross-references

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