P. troglodytes Gene: DCLK1 - ENSPTRG00000005778 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000005778
NameDCLK1
Descriptiondoublecortin like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2700]
OrganismPan troglodytes (chimpanzee)
Synonym(s)dcamkl1, dcdc3a, dclk, kiaa0369
Orthologs(s)8 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
662
  • 662
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
692
  • 692
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
837
  • 837
  • 995
  • 1.03e3
  • 1.97e3
  • 2.23e3
  • 2.50e3
96.63
  • 96.63
  • 96.00
  • 95.87
  • 92.09
  • 91.03
  • 89.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
874
  • 874
  • 1.30e3
  • 1.49e3
  • 1.77e3
  • 2.50e3
96.48
  • 96.48
  • 94.75
  • 94.02
  • 92.90
  • 89.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
911
  • 911
96.34
  • 96.34
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.09e3
  • 1.09e3
95.61
  • 95.61
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.38e3
  • 4.38e3
  • 5.52e3
  • 7.68e3
82.37
  • 82.37
  • 77.79
  • 69.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.19e3
  • 5.19e3
  • 5.89e3
  • 6.69e3
79.11
  • 79.11
  • 76.29
  • 73.09
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
8.68e3
  • 8.68e3
65.05
  • 65.05
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.16e4
  • 1.30e4
  • 1.41e4
55.40
  • 55.40
  • 53.43
  • 47.63
  • 43.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
54.93
  • 54.93
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
53.33
  • 53.33
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.67
  • 50.67
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
50.28
  • 50.28
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
44.42
  • 44.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.49e4
  • 1.60e4
43.28
  • 43.28
  • 40.16
  • 35.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.61e4
  • 1.61e4
35.12
  • 35.12
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
  • 1.87e4
35.03
  • 35.03
  • 24.70
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires4 species4 genesCompare expression
Boreoeutheria5 species5 genesCompare expression
Mammalia6 species6 genesCompare expression
Amniota7 species7 genesCompare expression
Euteleostomi8 species8 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000005778.

Cross-references

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