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P. troglodytes Gene: SLC8A3 - ENSPTRG00000006491 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000006491
NameSLC8A3
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 3 [Source:HGNC Symbol;Acc:HGNC:11070]
OrganismPan troglodytes (chimpanzee)
Synonym(s)ncx3
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
5.12e3
  • 5.12e3
79.41
  • 79.41
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
5.53e3
  • 5.53e3
77.74
  • 77.74
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.84e3
  • 5.84e3
  • 6.55e3
  • 9.38e3
  • 9.52e3
  • 9.86e3
  • 1.10e4
76.51
  • 76.51
  • 73.63
  • 62.23
  • 61.67
  • 60.30
  • 55.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.16e3
  • 6.16e3
  • 1.15e4
  • 1.27e4
75.19
  • 75.19
  • 53.64
  • 49.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.43e3
  • 6.43e3
  • 8.86e3
  • 9.17e3
  • 9.36e3
  • 9.53e3
74.13
  • 74.13
  • 64.32
  • 63.10
  • 62.34
  • 61.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
8.72e3
  • 8.72e3
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
8.84e3
  • 8.84e3
64.41
  • 64.41
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
9.44e3
  • 9.44e3
61.99
  • 61.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
  • 1.20e4
  • 1.37e4
55.44
  • 55.44
  • 51.89
  • 44.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
52.09
  • 52.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000006491.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000006491.

Cross-references

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