P. troglodytes Gene: SKOR1 - ENSPTRG00000007209 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000007209
NameSKOR1
DescriptionSKI family transcriptional corepressor 1 [Source:HGNC Symbol;Acc:HGNC:21326]
OrganismPan troglodytes (chimpanzee)
Synonym(s)corl1, fussel15, lbxcor1
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.81e3
  • 6.81e3
  • 9.19e3
  • 1.09e4
72.60
  • 72.60
  • 63.00
  • 56.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.14e3
  • 7.14e3
  • 7.78e3
  • 8.03e3
71.28
  • 71.28
  • 68.68
  • 67.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.99e3
  • 9.99e3
  • 1.17e4
  • 1.26e4
  • 1.27e4
  • 1.28e4
59.78
  • 59.78
  • 53.09
  • 49.41
  • 48.96
  • 48.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.22e4
  • 1.26e4
  • 1.26e4
  • 1.36e4
  • 1.43e4
57.93
  • 57.93
  • 51.06
  • 49.46
  • 49.16
  • 45.38
  • 42.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.14e4
  • 1.14e4
  • 1.60e4
54.09
  • 54.09
  • 35.50
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
48.50
  • 48.50
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
47.66
  • 47.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.44e4
  • 1.47e4
  • 1.74e4
46.00
  • 46.00
  • 42.22
  • 40.96
  • 29.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
45.76
  • 45.76
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.79e4
43.38
  • 43.38
  • 27.75
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
41.95
  • 41.95
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
41.73
  • 41.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.53e4
  • 1.70e4
38.76
  • 38.76
  • 38.31
  • 31.59
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species15 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000007209.

Cross-references

EnsemblENSPTRG00000007209 (SKOR1)
HGNCHGNC:21326 (SKOR1)
EMBLAACZ03099229, AACZ03099230, AACZ03099231, AACZ03099232
Uniprot/SPTREMBLH2Q9P1, H2Q9P1_PANTR, H2Q9P2, H2Q9P2_PANTR

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