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P. troglodytes Gene: CASKIN1 - ENSPTRG00000007645 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000007645
NameCASKIN1
DescriptionCASK interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20879]
OrganismPan troglodytes (chimpanzee)
Synonym(s)anks5a, kiaa1306
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.74e3
  • 1.74e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.16e3
  • 2.16e3
  • 2.45e3
  • 6.19e3
91.30
  • 91.30
  • 90.16
  • 75.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.28e3
  • 2.28e3
90.84
  • 90.84
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
2.44e3
  • 2.44e3
  • 2.55e3
  • 2.69e3
  • 2.73e3
  • 6.33e3
90.20
  • 90.20
  • 89.74
  • 89.19
  • 89.02
  • 74.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
90.12
  • 90.12
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
2.68e3
  • 2.68e3
  • 3.11e3
  • 3.43e3
  • 3.64e3
  • 4.13e3
  • 4.57e3
89.23
  • 89.23
  • 87.47
  • 86.21
  • 85.36
  • 83.36
  • 81.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
3.01e3
  • 3.01e3
  • 3.83e3
  • 5.88e3
87.89
  • 87.89
  • 84.60
  • 76.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
3.09e3
  • 3.09e3
87.58
  • 87.58
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
7.01e3
  • 7.01e3
71.77
  • 71.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
44.00
  • 44.00
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
43.14
  • 43.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
42.13
  • 42.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.69e4
  • 1.69e4
32.03
  • 32.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000007645.

Cross-references

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