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P. troglodytes Gene: DNASE1 - ENSPTRG00000007707 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000007707
NameDNASE1
Descriptiondeoxyribonuclease I [Source:HGNC Symbol;Acc:HGNC:2956]
OrganismPan troglodytes (chimpanzee)
Synonym(s)dnl1
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.46e3
  • 6.46e3
  • 1.10e4
74.00
  • 74.00
  • 55.74
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.48e3
  • 6.48e3
  • 1.05e4
  • 1.18e4
73.93
  • 73.93
  • 57.61
  • 52.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.93e3
  • 6.93e3
72.12
  • 72.12
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
7.66e3
  • 7.66e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.63e3
  • 8.63e3
65.27
  • 65.27
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
  • 9.57e3
  • 9.66e3
64.97
  • 64.97
  • 61.47
  • 61.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
9.21e3
  • 9.21e3
62.93
  • 62.93
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
9.38e3
  • 9.38e3
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.04e4
  • 1.08e4
  • 1.09e4
  • 1.12e4
59.35
  • 59.35
  • 58.20
  • 56.49
  • 56.18
  • 54.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
59.17
  • 59.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
  • 1.06e4
  • 1.06e4
  • 1.08e4
  • 1.12e4
  • 1.24e4
58.47
  • 58.47
  • 57.38
  • 57.18
  • 56.39
  • 55.10
  • 49.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
57.76
  • 57.76
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
57.43
  • 57.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
52.40
  • 52.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
  • 1.25e4
  • 1.48e4
  • 1.53e4
51.90
  • 51.90
  • 49.63
  • 40.56
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
50.02
  • 50.02
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.62
  • 49.62
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
48.97
  • 48.97
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
48.65
  • 48.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
1.28e4
  • 1.28e4
  • 1.33e4
  • 1.38e4
  • 1.45e4
48.61
  • 48.61
  • 46.45
  • 44.56
  • 41.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.33e4
  • 1.33e4
  • 1.34e4
46.47
  • 46.47
  • 46.25
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
44.90
  • 44.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species17 genesCompare expression
Euteleostomi16 species18 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000007707.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000007707.

Cross-references

EnsemblENSPTRG00000007707 (DNASE1)
HGNCHGNC:2956 (DNASE1)
EMBLAACZ03103606
Uniprot/SPTREMBLH2QAH1, H2QAH1_PANTR

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