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P. troglodytes Gene: CDH11 - ENSPTRG00000008189 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000008189
NameCDH11
Descriptioncadherin 11, type 2, OB-cadherin (osteoblast) [Source:HGNC Symbol;Acc:HGNC:1750]
OrganismPan troglodytes (chimpanzee)
Synonym(s)cad11, ob
Orthologs(s)19 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
462
  • 462
98.14
  • 98.14
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
770
  • 770
96.90
  • 96.90
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
94.95
  • 94.95
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
3.96e3
  • 3.96e3
  • 4.96e3
  • 6.56e3
  • 6.61e3
  • 7.21e3
  • 8.28e3
84.07
  • 84.07
  • 80.03
  • 73.60
  • 73.39
  • 70.96
  • 66.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
4.29e3
  • 4.29e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.38e3
  • 4.38e3
  • 6.59e3
82.39
  • 82.39
  • 73.46
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.67e3
  • 4.67e3
  • 6.42e3
  • 7.48e3
  • 7.87e3
  • 8.22e3
81.20
  • 81.20
  • 74.18
  • 69.88
  • 68.32
  • 66.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
4.69e3
  • 4.69e3
81.11
  • 81.11
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
6.12e3
  • 6.12e3
75.35
  • 75.35
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
6.63e3
  • 6.63e3
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.02e3
  • 7.02e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.62e3
  • 7.62e3
  • 8.37e3
  • 9.01e3
69.34
  • 69.34
  • 66.30
  • 63.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
7.74e3
  • 7.74e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
68.83
  • 68.83
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.20e3
  • 8.20e3
  • 8.28e3
  • 9.38e3
66.99
  • 66.99
  • 66.68
  • 62.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
66.64
  • 66.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
  • 1.06e4
  • 1.22e4
  • 1.43e4
62.73
  • 62.73
  • 57.18
  • 50.82
  • 42.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.04e4
  • 1.04e4
  • 1.29e4
58.34
  • 58.34
  • 48.27
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.15e4
57.43
  • 57.43
  • 53.71
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
56.18
  • 56.18
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.68
  • 50.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.33e4
  • 1.52e4
48.11
  • 48.11
  • 46.36
  • 38.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
46.37
  • 46.37
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.47
  • 39.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000008189.

Paralogs (same species)

Cross-references

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