P. troglodytes Gene: VTN - ENSPTRG00000008916 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000008916
NameVTN
Descriptionvitronectin [Source:HGNC Symbol;Acc:HGNC:12724]
OrganismPan troglodytes (chimpanzee)
Synonym(s)vn
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
40.6
  • 40.6
  • 57.0
  • 64.9
  • 249
99.84
  • 99.84
  • 99.77
  • 99.74
  • 99.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
490
  • 490
  • 983
  • 1.44e3
  • 1.78e3
98.03
  • 98.03
  • 96.04
  • 94.23
  • 92.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
6.78e3
  • 6.78e3
  • 9.06e3
  • 9.85e3
72.72
  • 72.72
  • 63.55
  • 60.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
8.19e3
  • 8.19e3
  • 1.04e4
  • 1.08e4
  • 1.15e4
  • 1.23e4
67.03
  • 67.03
  • 58.10
  • 56.50
  • 53.84
  • 50.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
  • 1.12e4
  • 1.13e4
  • 1.15e4
  • 1.32e4
  • 1.33e4
63.20
  • 63.20
  • 55.09
  • 54.35
  • 53.66
  • 47.00
  • 46.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.09e4
  • 1.26e4
59.62
  • 59.62
  • 56.30
  • 49.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
  • 1.87e4
56.20
  • 56.20
  • 24.74
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.45e4
54.02
  • 54.02
  • 41.45
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
53.78
  • 53.78
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
50.76
  • 50.76
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
46.71
  • 46.71
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
46.12
  • 46.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
42.31
  • 42.31
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
41.04
  • 41.04
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.85e4
37.51
  • 37.51
  • 25.62
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000008916.

Cross-references

EnsemblENSPTRG00000008916 (VTN)
HGNCHGNC:12724 (VTN)
EMBLAACZ03110824, GABF01009749
Uniprot/SPTREMBLH2QCH3, H2QCH3_PANTR

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