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P. troglodytes Gene: CORO6 - ENSPTRG00000008954 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000008954
NameCORO6
Descriptioncoronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
OrganismPan troglodytes (chimpanzee)
Synonym(s)flj14871
Orthologs(s)24 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
307
  • 307
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
675
  • 675
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
919
  • 919
  • 1.93e3
  • 2.34e3
  • 2.42e3
96.30
  • 96.30
  • 92.25
  • 90.58
  • 90.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.16e3
  • 1.16e3
  • 1.31e3
  • 2.40e3
  • 2.70e3
  • 3.50e3
  • 7.85e3
95.33
  • 95.33
  • 94.75
  • 90.33
  • 89.15
  • 85.91
  • 68.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.64e3
  • 1.64e3
93.42
  • 93.42
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.96e3
  • 1.96e3
  • 2.38e3
  • 2.84e3
  • 2.97e3
  • 3.80e3
92.12
  • 92.12
  • 90.41
  • 88.56
  • 88.07
  • 84.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.64e3
  • 2.64e3
89.38
  • 89.38
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
3.78e3
  • 3.78e3
  • 7.50e3
  • 1.16e4
84.78
  • 84.78
  • 69.81
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.19e3
  • 6.19e3
  • 8.99e3
  • 9.45e3
75.07
  • 75.07
  • 63.81
  • 61.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
7.67e3
  • 7.67e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
9.98e3
  • 9.98e3
59.84
  • 59.84
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
52.61
  • 52.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.31e4
  • 1.50e4
  • 1.65e4
49.92
  • 49.92
  • 47.13
  • 39.47
  • 33.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
48.76
  • 48.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.61e4
48.35
  • 48.35
  • 35.04
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
47.88
  • 47.88
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.75e4
40.68
  • 40.68
  • 29.40
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000008954.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Eumetazoa5 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000008954.

Cross-references

EnsemblENSPTRG00000008954 (CORO6)
HGNCHGNC:21356 (CORO6)
EMBLAACZ03110735
Uniprot/SPTREMBLH2QCK8, H2QCK8_PANTR

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