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P. troglodytes Gene: EFCAB3 - ENSPTRG00000009502 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000009502
NameEFCAB3
DescriptionEF-hand calcium binding domain 3 [Source:HGNC Symbol;Acc:HGNC:26379]
OrganismPan troglodytes (chimpanzee)
Synonym(s)flj25818
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
7.87e3
  • 7.87e3
  • 8.10e3
68.34
  • 68.34
  • 67.40
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
27.28
  • 27.28
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.90e4
  • 1.90e4
  • 1.95e4
  • 2.04e4
23.71
  • 23.71
  • 21.49
  • 17.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.90e4
  • 1.90e4
  • 2.04e4
23.37
  • 23.37
  • 17.92
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000009502.

Cross-references

EnsemblENSPTRG00000009502 (EFCAB3)
HGNCHGNC:26379 (EFCAB3)
EMBLAACZ03108663
Uniprot/SPTREMBLH2QDL9, H2QDL9_PANTR

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