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P. troglodytes Gene: ARHGDIA - ENSPTRG00000009773 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000009773
NameARHGDIA
DescriptionRho GDP dissociation inhibitor (GDI) alpha [Source:HGNC Symbol;Acc:HGNC:678]
OrganismPan troglodytes (chimpanzee)
Synonym(s)gdia1, rhogdi
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
230
  • 230
  • 606
  • 841
  • 1.65e3
99.08
  • 99.08
  • 97.56
  • 96.62
  • 93.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
257
  • 257
  • 1.29e3
98.97
  • 98.97
  • 94.80
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
314
  • 314
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
401
  • 401
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
468
  • 468
  • 1.04e3
  • 1.82e3
  • 2.30e3
98.12
  • 98.12
  • 95.82
  • 92.70
  • 90.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
473
  • 473
98.10
  • 98.10
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
487
  • 487
  • 494
  • 551
  • 560
  • 682
98.05
  • 98.05
  • 98.02
  • 97.79
  • 97.75
  • 97.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
489
  • 489
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
511
  • 511
  • 558
  • 569
  • 593
  • 694
  • 1.25e3
97.95
  • 97.95
  • 97.76
  • 97.71
  • 97.62
  • 97.21
  • 94.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
560
  • 560
  • 860
  • 1.76e3
97.75
  • 97.75
  • 96.54
  • 92.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
648
  • 648
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
686
  • 686
  • 1.64e3
97.24
  • 97.24
  • 93.42
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
915
  • 915
96.32
  • 96.32
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
  • 1.27e3
  • 1.40e3
95.74
  • 95.74
  • 94.91
  • 94.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
95.07
  • 95.07
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.71e3
  • 1.71e3
93.12
  • 93.12
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
2.30e3
  • 2.30e3
90.75
  • 90.75
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
90.03
  • 90.03
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
2.69e3
  • 2.69e3
89.16
  • 89.16
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
3.22e3
  • 3.22e3
87.05
  • 87.05
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.47e3
  • 3.47e3
86.06
  • 86.06
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
3.68e3
  • 3.68e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
67.15
  • 67.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Amniota14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression
Euteleostomi16 species17 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000009773.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000009773.

Cross-references

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