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P. troglodytes Gene: STXBP2 - ENSPTRG00000010397 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000010397
NameSTXBP2
Descriptionsyntaxin binding protein 2 [Source:HGNC Symbol;Acc:HGNC:11445]
OrganismPan troglodytes (chimpanzee)
Synonym(s)hunc18b, unc18b
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.07e3
  • 1.07e3
  • 3.34e3
95.68
  • 95.68
  • 86.54
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.30e3
  • 1.30e3
  • 2.33e3
94.78
  • 94.78
  • 90.63
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.62e3
  • 1.62e3
93.47
  • 93.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.25e3
  • 2.25e3
  • 3.16e3
  • 3.32e3
  • 6.74e3
90.95
  • 90.95
  • 87.30
  • 86.65
  • 72.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.81e3
  • 2.81e3
88.68
  • 88.68
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
3.88e3
  • 3.88e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
6.05e3
  • 6.05e3
75.65
  • 75.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
6.90e3
  • 6.90e3
72.24
  • 72.24
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.82e3
  • 7.82e3
  • 1.17e4
  • 1.35e4
68.52
  • 68.52
  • 52.97
  • 45.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.26e3
  • 8.26e3
  • 1.04e4
  • 1.12e4
  • 1.46e4
66.74
  • 66.74
  • 58.10
  • 54.74
  • 41.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
8.60e3
  • 8.60e3
65.40
  • 65.40
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
8.84e3
  • 8.84e3
  • 9.25e3
  • 1.01e4
  • 1.06e4
  • 1.11e4
64.43
  • 64.43
  • 62.75
  • 59.53
  • 57.32
  • 55.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
8.84e3
  • 8.84e3
  • 9.70e3
  • 1.07e4
  • 1.10e4
  • 1.16e4
  • 1.30e4
64.43
  • 64.43
  • 60.96
  • 57.05
  • 55.62
  • 53.29
  • 47.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
9.72e3
  • 9.72e3
  • 1.85e4
60.88
  • 60.88
  • 25.48
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
9.94e3
  • 9.94e3
59.97
  • 59.97
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
58.04
  • 58.04
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
55.72
  • 55.72
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
  • 1.14e4
  • 1.17e4
54.78
  • 54.78
  • 54.06
  • 52.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
53.68
  • 53.68
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
45.49
  • 45.49
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
44.00
  • 44.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000010397.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000010397.

Cross-references

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