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P. troglodytes Gene: QTRT1 - ENSPTRG00000010481 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000010481
NameQTRT1
Descriptionqueuine tRNA-ribosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23797]
OrganismPan troglodytes (chimpanzee)
Synonym(s)tgt
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
672
  • 672
  • 903
  • 2.30e3
97.30
  • 97.30
  • 96.37
  • 90.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
969
  • 969
  • 1.24e3
  • 1.76e3
  • 2.32e3
  • 3.20e3
  • 4.02e3
96.10
  • 96.10
  • 94.99
  • 92.90
  • 90.66
  • 87.10
  • 83.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.17e3
  • 1.17e3
  • 1.68e3
  • 1.86e3
  • 1.99e3
  • 3.27e3
95.28
  • 95.28
  • 93.23
  • 92.51
  • 92.00
  • 86.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.74e3
  • 1.74e3
  • 5.32e3
93.01
  • 93.01
  • 78.59
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
2.34e3
  • 2.34e3
  • 3.37e3
  • 3.87e3
  • 5.32e3
90.57
  • 90.57
  • 86.46
  • 84.43
  • 78.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.35e3
  • 2.35e3
  • 3.01e3
  • 4.74e3
90.56
  • 90.56
  • 87.89
  • 80.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.68e3
  • 2.68e3
89.21
  • 89.21
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.18e3
  • 3.18e3
87.19
  • 87.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
4.48e3
  • 4.48e3
  • 4.49e3
  • 6.15e3
  • 7.06e3
81.97
  • 81.97
  • 81.93
  • 75.25
  • 71.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
5.00e3
  • 5.00e3
79.90
  • 79.90
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
5.64e3
  • 5.64e3
77.31
  • 77.31
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.84e3
  • 5.84e3
76.51
  • 76.51
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
6.64e3
  • 6.64e3
73.27
  • 73.27
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
6.90e3
  • 6.90e3
72.21
  • 72.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
7.40e3
  • 7.40e3
  • 1.03e4
70.21
  • 70.21
  • 58.58
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
7.49e3
  • 7.49e3
69.86
  • 69.86
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
8.01e3
  • 8.01e3
67.76
  • 67.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
9.04e3
  • 9.04e3
63.59
  • 63.59
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
59.59
  • 59.59
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
57.96
  • 57.96
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
57.19
  • 57.19
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
56.23
  • 56.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000010481.

Cross-references

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