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P. troglodytes Gene: ZSWIM4 - ENSPTRG00000010567 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000010567
NameZSWIM4
Descriptionzinc finger, SWIM-type containing 4 [Source:HGNC Symbol;Acc:HGNC:25704]
OrganismPan troglodytes (chimpanzee)
Synonym(s)flj12221
Orthologs(s)14 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
6.92e3
  • 6.92e3
  • 1.17e4
  • 1.21e4
  • 1.46e4
72.15
  • 72.15
  • 52.71
  • 51.24
  • 41.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.13e3
  • 7.13e3
  • 1.23e4
  • 1.33e4
71.32
  • 71.32
  • 50.31
  • 46.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.95e3
  • 8.95e3
  • 9.13e3
  • 1.02e4
  • 1.03e4
  • 1.11e4
63.97
  • 63.97
  • 63.25
  • 58.81
  • 58.64
  • 55.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.81e3
  • 9.81e3
  • 9.91e3
  • 1.07e4
  • 1.09e4
  • 1.13e4
  • 1.20e4
60.53
  • 60.53
  • 60.12
  • 56.82
  • 56.00
  • 54.69
  • 51.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
9.86e3
  • 9.86e3
60.29
  • 60.29
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
9.96e3
  • 9.96e3
59.90
  • 59.90
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
58.41
  • 58.41
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
57.78
  • 57.78
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
  • 1.30e4
  • 1.36e4
53.41
  • 53.41
  • 47.70
  • 45.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
52.40
  • 52.40
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.18e4
  • 1.28e4
  • 1.35e4
52.35
  • 52.35
  • 52.35
  • 48.37
  • 45.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
51.60
  • 51.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.48e4
51.26
  • 51.26
  • 40.54
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
51.20
  • 51.20
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.55
  • 49.55
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
48.83
  • 48.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
44.66
  • 44.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
  • 1.68e4
36.72
  • 36.72
  • 32.32
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000010567.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000010567.

Cross-references

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