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P. troglodytes Gene: B3GNT3 - ENSPTRG00000010684 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000010684
NameB3GNT3
DescriptionUDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:13528]
OrganismPan troglodytes (chimpanzee)
Synonym(s)b3gn-t3, b3gnt-3, beta3gn-t3, hp10328, tmem3
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.37e4
  • 1.62e4
47.51
  • 47.51
  • 44.78
  • 34.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
44.06
  • 44.06
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.62e4
  • 1.62e4
34.86
  • 34.86
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
31.17
  • 31.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.96e4
  • 1.96e4
  • 2.04e4
21.06
  • 21.06
  • 17.84
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Tetrapoda13 species14 genesCompare expression
Euteleostomi14 species18 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000010684.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSPTRG00000010684.

Cross-references

EnsemblENSPTRG00000010684 (B3GNT3)
HGNCHGNC:13528 (B3GNT3)
EMBLAACZ03120113
Uniprot/SPTREMBLH2QFR8, H2QFR8_PANTR

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