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P. troglodytes Gene: - ENSPTRG00000010842 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000010842
Name-
Description-
OrganismPan troglodytes (chimpanzee)
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.46e4
  • 1.61e4
52.06
  • 52.06
  • 41.15
  • 35.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.68e4
41.83
  • 41.83
  • 32.41
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.77e4
  • 1.77e4
  • 1.87e4
35.44
  • 35.44
  • 28.89
  • 28.88
  • 24.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 1.72e4
  • 1.76e4
  • 1.85e4
  • 2.05e4
35.12
  • 35.12
  • 30.56
  • 29.01
  • 25.33
  • 17.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
28.01
  • 28.01
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
25.80
  • 25.80
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
25.11
  • 25.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species3 genesCompare expression
Catarrhini3 species4 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000010842.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Pan1 geneCompare expression
Sarcopterygii2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000010842.

Cross-references

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