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P. troglodytes Gene: LGALS4 - ENSPTRG00000010939 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000010939
NameLGALS4
Descriptionlectin, galactoside-binding, soluble, 4 [Source:HGNC Symbol;Acc:HGNC:6565]
OrganismPan troglodytes (chimpanzee)
Synonym(s)gal4
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.01e4
  • 1.01e4
  • 1.08e4
  • 1.39e4
  • 1.43e4
59.23
  • 59.23
  • 56.62
  • 44.14
  • 42.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
  • 1.45e4
  • 1.66e4
47.76
  • 47.76
  • 41.79
  • 33.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
  • 1.73e4
  • 1.73e4
  • 1.87e4
  • 1.90e4
46.51
  • 46.51
  • 30.28
  • 30.23
  • 24.64
  • 23.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.41e4
  • 1.41e4
  • 1.48e4
  • 1.82e4
  • 1.94e4
  • 2.24e4
43.08
  • 43.08
  • 40.57
  • 26.66
  • 21.97
  • 9.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
42.46
  • 42.46
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
  • 1.64e4
  • 1.66e4
41.32
  • 41.32
  • 33.89
  • 33.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.74
  • 39.74
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
34.09
  • 34.09
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
  • 1.80e4
33.11
  • 33.11
  • 27.48
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
31.31
  • 31.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.72e4
  • 1.72e4
30.60
  • 30.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000010939.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000010939.

Cross-references

EnsemblENSPTRG00000010939 (LGALS4)
HGNCHGNC:6565 (LGALS4)
EMBLAACZ03117011, AACZ03117012
Uniprot/SPTREMBLH2QG91, H2QG91_PANTR

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