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P. troglodytes Gene: LTBP1 - ENSPTRG00000011821 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000011821
NameLTBP1
Descriptionlatent transforming growth factor beta binding protein 1 [Source:HGNC Symbol;Acc:HGNC:6714]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
539
  • 539
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
683
  • 683
97.25
  • 97.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.04e3
  • 2.04e3
  • 2.64e3
  • 2.76e3
  • 3.57e3
91.78
  • 91.78
  • 89.38
  • 88.90
  • 85.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
2.58e3
  • 2.58e3
89.60
  • 89.60
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.06e3
  • 5.06e3
79.62
  • 79.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
5.66e3
  • 5.66e3
  • 7.20e3
  • 8.31e3
  • 1.09e4
77.22
  • 77.22
  • 71.00
  • 66.56
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
6.99e3
  • 6.99e3
71.87
  • 71.87
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
7.91e3
  • 7.91e3
68.16
  • 68.16
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
7.94e3
  • 7.94e3
68.05
  • 68.05
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
7.99e3
  • 7.99e3
67.82
  • 67.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.21e3
  • 8.21e3
  • 9.11e3
66.95
  • 66.95
  • 63.31
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.28e3
  • 8.28e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.44e3
  • 8.44e3
  • 1.02e4
66.02
  • 66.02
  • 59.02
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
9.81e3
  • 9.81e3
60.50
  • 60.50
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
58.82
  • 58.82
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
57.25
  • 57.25
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
  • 1.12e4
  • 1.16e4
  • 1.18e4
  • 1.37e4
57.07
  • 57.07
  • 54.96
  • 53.39
  • 52.48
  • 44.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
  • 1.17e4
  • 1.20e4
  • 1.23e4
  • 1.24e4
  • 1.38e4
56.58
  • 56.58
  • 52.71
  • 51.89
  • 50.68
  • 50.07
  • 44.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
55.89
  • 55.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.36e4
54.05
  • 54.05
  • 51.54
  • 45.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
  • 1.42e4
  • 1.45e4
47.82
  • 47.82
  • 42.87
  • 41.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
39.11
  • 39.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000011821.

Cross-references

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