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P. troglodytes Gene: CD28 - ENSPTRG00000012833 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000012833
NameCD28
DescriptionCD28 molecule [Source:HGNC Symbol;Acc:HGNC:1653]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
90.03
  • 90.03
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
5.12e3
  • 5.12e3
79.40
  • 79.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
59.29
  • 59.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 1.52e4
  • 1.53e4
  • 1.61e4
50.91
  • 50.91
  • 38.93
  • 38.30
  • 35.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
47.85
  • 47.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
1.50e4
  • 1.50e4
  • 1.55e4
  • 1.78e4
39.81
  • 39.81
  • 37.65
  • 28.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.62e4
  • 1.62e4
34.74
  • 34.74
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
34.21
  • 34.21
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
32.33
  • 32.33
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
30.29
  • 30.29
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.85e4
  • 1.85e4
25.61
  • 25.61
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.95e4
  • 1.95e4
  • 1.97e4
  • 2.04e4
21.57
  • 21.57
  • 20.71
  • 18.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.96e4
  • 1.96e4
  • 2.01e4
21.03
  • 21.03
  • 19.18
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.02e4
  • 2.02e4
18.83
  • 18.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000012833.

Cross-references

EnsemblENSPTRG00000012833 (CD28)
HGNCHGNC:1653 (CD28)
EMBLAACZ03016400
Uniprot/SPTREMBLH2QJ99, H2QJ99_PANTR

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