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P. troglodytes Gene: ARPC2 - ENSPTRG00000012911 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000012911
NameARPC2
Descriptionactin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
OrganismPan troglodytes (chimpanzee)
Synonym(s)arc34, p34-arc
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
292
  • 292
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
367
  • 367
  • 474
  • 540
  • 561
  • 581
  • 679
98.53
  • 98.53
  • 98.10
  • 97.83
  • 97.75
  • 97.66
  • 97.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
373
  • 373
  • 608
98.50
  • 98.50
  • 97.56
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
475
  • 475
  • 580
  • 622
  • 682
  • 796
98.09
  • 98.09
  • 97.67
  • 97.50
  • 97.26
  • 96.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
578
  • 578
  • 606
  • 751
  • 901
97.68
  • 97.68
  • 97.56
  • 96.98
  • 96.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
581
  • 581
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
583
  • 583
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
638
  • 638
  • 841
  • 1.08e3
  • 1.98e3
97.44
  • 97.44
  • 96.62
  • 95.66
  • 92.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
647
  • 647
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
656
  • 656
97.36
  • 97.36
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
701
  • 701
  • 1.21e3
97.18
  • 97.18
  • 95.13
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
707
  • 707
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
721
  • 721
97.10
  • 97.10
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
735
  • 735
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
875
  • 875
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
902
  • 902
96.37
  • 96.37
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
905
  • 905
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
925
  • 925
  • 1.19e3
  • 1.66e3
96.28
  • 96.28
  • 95.21
  • 93.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
972
  • 972
  • 986
  • 1.01e3
96.09
  • 96.09
  • 96.04
  • 95.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
987
  • 987
96.03
  • 96.03
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.04e3
  • 1.04e3
95.81
  • 95.81
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.59e3
  • 1.59e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
93.11
  • 93.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000012911.

Cross-references

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