P. troglodytes Gene: CTDSP1 - ENSPTRG00000012918 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000012918
NameCTDSP1
DescriptionCTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
OrganismPan troglodytes (chimpanzee)
Synonym(s)nliif, scp1
Orthologs(s)17 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
967
  • 967
  • 2.00e3
  • 2.23e3
  • 3.05e3
96.11
  • 96.11
  • 91.96
  • 91.03
  • 87.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.37e3
  • 1.37e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.59e3
  • 1.59e3
  • 3.02e3
93.62
  • 93.62
  • 87.85
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.35e3
  • 2.35e3
90.56
  • 90.56
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.64e3
  • 2.64e3
  • 2.76e3
  • 3.29e3
  • 4.72e3
89.37
  • 89.37
  • 88.88
  • 86.74
  • 81.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
5.16e3
  • 5.16e3
  • 5.45e3
  • 6.92e3
  • 7.04e3
  • 7.11e3
  • 8.18e3
79.22
  • 79.22
  • 78.05
  • 72.14
  • 71.68
  • 71.36
  • 67.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
5.41e3
  • 5.41e3
  • 5.87e3
  • 6.10e3
  • 6.53e3
  • 7.12e3
78.24
  • 78.24
  • 76.37
  • 75.46
  • 73.72
  • 71.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
5.58e3
  • 5.58e3
  • 5.68e3
  • 6.50e3
77.54
  • 77.54
  • 77.15
  • 73.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
5.63e3
  • 5.63e3
77.36
  • 77.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.75e3
  • 5.75e3
  • 6.00e3
  • 1.02e4
76.84
  • 76.84
  • 75.86
  • 59.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
5.88e3
  • 5.88e3
76.33
  • 76.33
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
6.01e3
  • 6.01e3
75.79
  • 75.79
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
6.05e3
  • 6.05e3
75.66
  • 75.66
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
6.38e3
  • 6.38e3
74.32
  • 74.32
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.47e3
  • 6.47e3
73.98
  • 73.98
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
6.53e3
  • 6.53e3
73.72
  • 73.72
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
7.04e3
  • 7.04e3
71.67
  • 71.67
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
7.44e3
  • 7.44e3
70.06
  • 70.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
  • 1.02e4
68.91
  • 68.91
  • 58.95
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
9.64e3
  • 9.64e3
61.20
  • 61.20
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
58.82
  • 58.82
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
47.54
  • 47.54
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
36.32
  • 36.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000012918.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta4 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000012918.

Cross-references

EnsemblENSPTRG00000012918 (CTDSP1)
HGNCHGNC:21614 (CTDSP1)
EMBLAACZ03018870, AACZ03018871
Uniprot/SPTREMBLH2QJE8, H2QJE8_PANTR

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