P. troglodytes Gene: RSPO4 - ENSPTRG00000013154 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000013154
NameRSPO4
DescriptionR-spondin 4 [Source:HGNC Symbol;Acc:HGNC:16175]
OrganismPan troglodytes (chimpanzee)
Synonym(s)c20orf182, dj824f16.3
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.05e4
  • 1.05e4
  • 1.34e4
57.82
  • 57.82
  • 45.90
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.31e4
  • 1.33e4
54.58
  • 54.58
  • 47.22
  • 46.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.19e4
  • 1.28e4
  • 1.29e4
  • 1.32e4
  • 1.47e4
53.63
  • 53.63
  • 52.13
  • 48.64
  • 47.98
  • 46.82
  • 40.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.28e4
  • 1.30e4
  • 1.31e4
52.98
  • 52.98
  • 48.40
  • 47.52
  • 47.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
48.67
  • 48.67
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
  • 1.74e4
46.31
  • 46.31
  • 30.13
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
  • 1.40e4
  • 1.54e4
44.02
  • 44.02
  • 43.48
  • 37.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
43.38
  • 43.38
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
42.91
  • 42.91
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
42.00
  • 42.00
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
37.13
  • 37.13
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.57e4
  • 1.57e4
  • 1.63e4
  • 1.65e4
  • 1.80e4
36.98
  • 36.98
  • 34.20
  • 33.78
  • 27.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
  • 1.87e4
  • 2.01e4
34.03
  • 34.03
  • 24.65
  • 18.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
25.23
  • 25.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000013154.

Cross-references

EnsemblENSPTRG00000013154 (RSPO4)
HGNCHGNC:16175 (RSPO4)
EMBLAACZ03122233, AACZ03122234
Uniprot/SPTREMBLH2QJT1, H2QJT1_PANTR

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