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P. troglodytes Gene: CHRNA4 - ENSPTRG00000013735 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000013735
NameCHRNA4
Descriptioncholinergic receptor, nicotinic alpha 4 [Source:HGNC Symbol;Acc:HGNC:1958]
OrganismPan troglodytes (chimpanzee)
Synonym(s)bfnc, ebn, ebn1
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
2.94e3
  • 2.94e3
  • 3.84e3
  • 7.31e3
  • 8.05e3
  • 8.84e3
  • 9.91e3
88.17
  • 88.17
  • 84.55
  • 70.58
  • 67.58
  • 64.40
  • 60.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
3.62e3
  • 3.62e3
  • 6.33e3
  • 6.40e3
  • 6.79e3
  • 7.81e3
85.44
  • 85.44
  • 74.52
  • 74.22
  • 72.66
  • 68.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.89e3
  • 5.89e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
8.37e3
  • 8.37e3
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
9.38e3
  • 9.38e3
62.26
  • 62.26
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.44e4
  • 1.55e4
49.45
  • 49.45
  • 42.22
  • 37.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
  • 1.44e4
  • 1.53e4
48.36
  • 48.36
  • 42.05
  • 38.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.45e4
  • 1.45e4
  • 1.46e4
41.56
  • 41.56
  • 41.08
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
37.01
  • 37.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.74e4
  • 1.74e4
29.96
  • 29.96
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
28.33
  • 28.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSPTRG00000013735.

Cross-references

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