P. paniscus Gene: COL18A1 - ENSPTRG00000014005 - Pan paniscus (bonobo)

General information

Ensembl IDENSPTRG00000014005
NameCOL18A1
Descriptioncollagen, type XVIII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2195]
OrganismPan paniscus (bonobo)
Synonym(s)kno, kno1, ks

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
975
  • 975
  • 1.25e3
95.27929
  • 95.27929
  • 93.96583
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.01e3
  • 1.01e3
  • 1.76e3
95.09512
  • 95.09512
  • 91.45523
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.57e3
  • 1.57e3
  • 4.67e3
92.41973
  • 92.41973
  • 77.35611
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.69e3
  • 2.69e3
  • 7.74e3
86.97686
  • 86.97686
  • 62.51545
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.58e3
  • 8.58e3
  • 1.25e4
58.42176
  • 58.42176
  • 39.44020
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
53.08373
  • 53.08373
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL954258
HGNCHGNC:2195 (COL18A1)
Uniprot/SPTREMBLH2RAH2, H2RAH2_PANTR

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