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P. troglodytes Gene: SEPT5 - ENSPTRG00000014066 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000014066
NameSEPT5
Descriptionseptin 5 [Source:HGNC Symbol;Acc:HGNC:9164]
OrganismPan troglodytes (chimpanzee)
Synonym(s)h5, hcdcrel-1, pnutl1
Orthologs(s)22 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
117
  • 117
99.53
  • 99.53
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
125
  • 125
  • 149
  • 165
  • 168
  • 211
99.50
  • 99.50
  • 99.40
  • 99.34
  • 99.33
  • 99.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
153
  • 153
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
170
  • 170
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
196
  • 196
  • 203
  • 221
  • 238
  • 268
  • 287
99.22
  • 99.22
  • 99.19
  • 99.11
  • 99.05
  • 98.93
  • 98.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
220
  • 220
99.12
  • 99.12
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
301
  • 301
  • 404
  • 467
98.79
  • 98.79
  • 98.38
  • 98.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
385
  • 385
  • 486
  • 2.29e3
98.45
  • 98.45
  • 98.05
  • 90.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
598
  • 598
97.60
  • 97.60
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
667
  • 667
  • 1.27e3
  • 2.09e3
  • 4.12e3
97.32
  • 97.32
  • 94.89
  • 91.59
  • 83.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.80e3
  • 1.80e3
  • 5.57e3
92.78
  • 92.78
  • 77.57
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.53e3
  • 4.53e3
81.78
  • 81.78
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
6.89e3
  • 6.89e3
72.27
  • 72.27
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
7.37e3
  • 7.37e3
70.33
  • 70.33
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
9.03e3
  • 9.03e3
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
9.37e3
  • 9.37e3
62.27
  • 62.27
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
9.90e3
  • 9.90e3
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.92e3
  • 9.92e3
  • 1.45e4
60.07
  • 60.07
  • 41.45
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.20e4
  • 1.33e4
  • 1.58e4
58.45
  • 58.45
  • 51.59
  • 46.33
  • 36.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
52.89
  • 52.89
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
47.90
  • 47.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
43.54
  • 43.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000014066.

Paralogs (same species)

Paralogy information comes from OMA : ENSPTRG00000014066.

Cross-references

EnsemblENSPTRG00000014066 (SEPT5)
HGNCHGNC:9164 (SEPT5)
EMBLAACZ03127040, AACZ03127041
Uniprot/SPTREMBLH2R735, H2R735_PANTR

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