P. troglodytes Gene: MLC1 - ENSPTRG00000014527 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000014527
NameMLC1
Descriptionmegalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
OrganismPan troglodytes (chimpanzee)
Synonym(s)kiaa0027, lvm, mlc, vl
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
570
  • 570
  • 1.47e3
  • 5.56e3
97.71
  • 97.71
  • 94.09
  • 77.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
769
  • 769
96.91
  • 96.91
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
911
  • 911
  • 1.22e3
  • 1.44e3
96.34
  • 96.34
  • 95.10
  • 94.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
952
  • 952
  • 1.37e3
  • 1.77e3
  • 3.05e3
  • 3.51e3
  • 6.22e3
96.17
  • 96.17
  • 94.47
  • 92.89
  • 87.71
  • 85.88
  • 74.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.35e3
  • 1.35e3
  • 2.57e3
  • 3.09e3
  • 3.47e3
  • 3.47e3
94.58
  • 94.58
  • 89.66
  • 87.58
  • 86.05
  • 86.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
  • 2.14e3
93.11
  • 93.11
  • 91.38
AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.33e3
  • 2.33e3
90.61
  • 90.61
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
3.27e3
  • 3.27e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
4.80e3
  • 4.80e3
80.69
  • 80.69
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
50.25
  • 50.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.73e4
  • 1.73e4
30.42
  • 30.42
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.98e4
  • 1.98e4
20.27
  • 20.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000014527.

Cross-references

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