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P. troglodytes Gene: - ENSPTRG00000015022 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000015022
Name-
Description-
OrganismPan troglodytes (chimpanzee)
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
7.66e3
  • 7.66e3
69.16
  • 69.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
  • 8.44e3
  • 8.45e3
  • 1.11e4
67.97
  • 67.97
  • 66.02
  • 66.00
  • 55.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.47e3
  • 8.47e3
  • 1.08e4
65.89
  • 65.89
  • 56.37
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
8.98e3
  • 8.98e3
  • 9.65e3
  • 9.71e3
  • 1.02e4
  • 1.02e4
  • 1.07e4
63.84
  • 63.84
  • 61.14
  • 60.93
  • 59.13
  • 58.95
  • 56.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
9.00e3
  • 9.00e3
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.04e3
  • 9.04e3
  • 1.07e4
  • 1.15e4
63.62
  • 63.62
  • 57.08
  • 53.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.24e3
  • 9.24e3
  • 9.67e3
  • 1.11e4
  • 1.34e4
62.82
  • 62.82
  • 61.09
  • 55.25
  • 45.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
9.24e3
  • 9.24e3
  • 9.58e3
  • 9.61e3
  • 9.92e3
  • 9.94e3
62.80
  • 62.80
  • 61.43
  • 61.33
  • 60.08
  • 59.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.60e3
  • 9.60e3
  • 1.31e4
61.37
  • 61.37
  • 47.28
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
9.70e3
  • 9.70e3
60.96
  • 60.96
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.85e3
  • 9.85e3
  • 1.01e4
  • 1.05e4
60.36
  • 60.36
  • 59.16
  • 57.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
9.98e3
  • 9.98e3
59.81
  • 59.81
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
58.55
  • 58.55
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.57
  • 49.57
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
48.77
  • 48.77
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
48.08
  • 48.08
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
46.57
  • 46.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
46.36
  • 46.36
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
40.61
  • 40.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000015022.

Cross-references

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