We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

P. troglodytes Gene: SAMD7 - ENSPTRG00000015610 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000015610
NameSAMD7
Descriptionsterile alpha motif domain containing 7 [Source:HGNC Symbol;Acc:HGNC:25394]
OrganismPan troglodytes (chimpanzee)
Synonym(s)dkfzp686e1583
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
  • 1.57e4
  • 1.65e4
  • 1.85e4
40.49
  • 40.49
  • 36.88
  • 33.54
  • 25.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
  • 1.60e4
  • 1.73e4
  • 1.85e4
  • 1.96e4
37.08
  • 37.08
  • 35.51
  • 30.22
  • 25.58
  • 21.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
36.87
  • 36.87
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
33.75
  • 33.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.74e4
  • 1.74e4
29.96
  • 29.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000015610.

Cross-references

EnsemblENSPTRG00000015610 (SAMD7)
HGNCHGNC:25394 (SAMD7)
EMBLAACZ03022390
Uniprot/SPTREMBLH2QNQ2, H2QNQ2_PANTR

Do not show this banner again