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P. troglodytes Gene: CLDN11 - ENSPTRG00000015617 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000015617
NameCLDN11
Descriptionclaudin 11 [Source:HGNC Symbol;Acc:HGNC:8514]
OrganismPan troglodytes (chimpanzee)
Synonym(s)osp, otm
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
474
  • 474
  • 1.29e3
98.10
  • 98.10
  • 94.80
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.40e3
  • 1.40e3
94.37
  • 94.37
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.46e3
  • 1.46e3
94.12
  • 94.12
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
  • 3.99e3
  • 4.27e3
94.03
  • 94.03
  • 83.96
  • 82.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
1.80e3
  • 1.80e3
  • 2.10e3
  • 2.66e3
  • 4.15e3
  • 5.82e3
  • 6.78e3
92.75
  • 92.75
  • 91.54
  • 89.29
  • 83.31
  • 76.57
  • 72.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.99e3
  • 1.99e3
  • 3.40e3
  • 3.78e3
  • 5.43e3
  • 6.32e3
91.97
  • 91.97
  • 86.31
  • 84.80
  • 78.15
  • 74.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.54e3
  • 2.54e3
89.76
  • 89.76
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
2.76e3
  • 2.76e3
88.88
  • 88.88
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
3.74e3
  • 3.74e3
  • 9.62e3
84.96
  • 84.96
  • 61.29
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.97e3
  • 3.97e3
  • 5.37e3
  • 7.45e3
84.03
  • 84.03
  • 78.40
  • 70.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
77.67
  • 77.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.43e3
  • 9.43e3
  • 1.10e4
  • 1.11e4
  • 1.30e4
62.06
  • 62.06
  • 55.53
  • 55.21
  • 47.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
9.60e3
  • 9.60e3
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
57.99
  • 57.99
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
53.96
  • 53.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.17e4
  • 1.19e4
  • 1.34e4
53.91
  • 53.91
  • 52.96
  • 51.98
  • 46.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.42
  • 50.42
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
49.96
  • 49.96
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.30e4
49.25
  • 49.25
  • 47.48
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
45.91
  • 45.91
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
41.61
  • 41.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000015617.

Cross-references

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