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P. troglodytes Gene: GABRA2 - ENSPTRG00000016026 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000016026
NameGABRA2
Descriptiongamma-aminobutyric acid (GABA) A receptor, alpha 2 [Source:HGNC Symbol;Acc:HGNC:4076]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)19 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.81e3
  • 1.81e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.43e3
  • 2.43e3
90.22
  • 90.22
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
2.96e3
  • 2.96e3
  • 4.41e3
88.08
  • 88.08
  • 82.27
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
3.15e3
  • 3.15e3
  • 5.80e3
  • 5.94e3
  • 6.60e3
  • 8.76e3
87.31
  • 87.31
  • 76.67
  • 76.08
  • 73.45
  • 64.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
3.26e3
  • 3.26e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
3.52e3
  • 3.52e3
  • 4.56e3
  • 5.41e3
  • 6.25e3
  • 6.28e3
  • 6.30e3
85.84
  • 85.84
  • 81.65
  • 78.22
  • 74.83
  • 74.70
  • 74.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
4.51e3
  • 4.51e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.33e3
  • 5.33e3
  • 8.01e3
  • 9.74e3
78.56
  • 78.56
  • 67.75
  • 60.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.49e3
  • 7.49e3
  • 9.25e3
  • 1.11e4
69.83
  • 69.83
  • 62.75
  • 55.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
53.12
  • 53.12
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.54
  • 49.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
  • 1.49e4
40.99
  • 40.99
  • 39.99
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
36.23
  • 36.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000016026.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000016026.

Cross-references

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