We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

P. troglodytes Gene: SCRG1 - ENSPTRG00000016599 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000016599
NameSCRG1
Descriptionstimulator of chondrogenesis 1 [Source:HGNC Symbol;Acc:HGNC:17036]
OrganismPan troglodytes (chimpanzee)
Synonym(s)scrg-1
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.26e3
  • 1.26e3
  • 4.18e3
94.93
  • 94.93
  • 83.19
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
1.57e3
  • 1.57e3
  • 1.73e3
  • 1.78e3
  • 2.18e3
  • 2.76e3
  • 5.82e3
93.70
  • 93.70
  • 93.04
  • 92.83
  • 91.22
  • 88.90
  • 76.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.62e3
  • 1.62e3
  • 4.32e3
  • 5.50e3
93.47
  • 93.47
  • 82.62
  • 77.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.74e3
  • 1.74e3
  • 1.85e3
  • 2.05e3
  • 2.19e3
  • 2.24e3
92.99
  • 92.99
  • 92.55
  • 91.76
  • 91.19
  • 90.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.18e3
  • 2.18e3
  • 2.50e3
  • 4.39e3
91.22
  • 91.22
  • 89.94
  • 82.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.25e3
  • 2.25e3
90.95
  • 90.95
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.81e3
  • 3.81e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
3.82e3
  • 3.82e3
84.62
  • 84.62
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
6.64e3
  • 6.64e3
73.28
  • 73.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.75e3
  • 7.75e3
  • 1.30e4
  • 1.46e4
  • 1.52e4
68.81
  • 68.81
  • 47.72
  • 41.15
  • 38.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
57.73
  • 57.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.43e4
52.56
  • 52.56
  • 42.37
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
49.64
  • 49.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
47.93
  • 47.93
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
46.27
  • 46.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.46e4
  • 1.69e4
41.81
  • 41.81
  • 41.06
  • 32.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
37.82
  • 37.82
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
37.01
  • 37.01
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
31.63
  • 31.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000016599.

Cross-references

Do not show this banner again