P. troglodytes Gene: HAND2 - ENSPTRG00000016601 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000016601
NameHAND2
Descriptionheart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
OrganismPan troglodytes (chimpanzee)
Synonym(s)bhlha26, dhand, hed, thing2
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.50e3
  • 1.50e3
  • 1.58e3
  • 3.34e3
  • 4.22e3
93.98
  • 93.98
  • 93.63
  • 86.55
  • 83.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
2.75e3
  • 2.75e3
88.93
  • 88.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
  • 8.66e3
  • 9.39e3
  • 1.10e4
71.41
  • 71.41
  • 65.16
  • 62.19
  • 55.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
8.77e3
  • 8.77e3
64.72
  • 64.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
44.64
  • 44.64
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
33.31
  • 33.31
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.07e4
  • 2.07e4
  • 2.13e4
16.58
  • 16.58
  • 14.32
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000016601.

Cross-references

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