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P. troglodytes Gene: TAS2R1 - ENSPTRG00000016723 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000016723
NameTAS2R1
Descriptiontaste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]
OrganismPan troglodytes (chimpanzee)
Synonym(s)patr-t2r1, t2r1, trb7
Orthologs(s)15 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
  • 1.60e4
  • 1.62e4
  • 1.74e4
  • 1.97e4
36.51
  • 36.51
  • 35.78
  • 34.78
  • 30.15
  • 20.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.67e4
  • 1.67e4
32.62
  • 32.62
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
  • 2.05e4
31.95
  • 31.95
  • 17.53
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.73e4
  • 1.73e4
  • 2.00e4
  • 2.07e4
30.23
  • 30.23
  • 19.45
  • 16.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
20.73
  • 20.73
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.04e4
  • 2.04e4
17.94
  • 17.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species10 genesCompare expression
Boreoeutheria11 species14 genesCompare expression
Theria12 species15 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000016723.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii6 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000016723.

Cross-references

EnsemblENSPTRG00000016723 (TAS2R1)
HGNCHGNC:14909 (TAS2R1)
EMBLAACZ03040390, AB713189
Uniprot/SPTREMBLH2QQM5, H2QQM5_PANTR

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