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P. troglodytes Gene: CDH10 - ENSPTRG00000016758 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000016758
NameCDH10
Descriptioncadherin 10, type 2 (T2-cadherin) [Source:HGNC Symbol;Acc:HGNC:1749]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)17 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
2.47e3
  • 2.47e3
  • 3.57e3
90.08
  • 90.08
  • 85.62
AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.67e3
  • 2.67e3
89.27
  • 89.27
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
2.99e3
  • 2.99e3
  • 3.88e3
  • 4.11e3
  • 4.46e3
  • 5.79e3
  • 5.93e3
87.95
  • 87.95
  • 84.38
  • 83.45
  • 82.03
  • 76.69
  • 76.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
3.11e3
  • 3.11e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.92e3
  • 3.92e3
  • 4.12e3
  • 4.70e3
  • 4.94e3
  • 5.26e3
84.22
  • 84.22
  • 83.44
  • 81.08
  • 80.12
  • 78.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
4.69e3
  • 4.69e3
81.11
  • 81.11
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
5.62e3
  • 5.62e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.18e3
  • 7.18e3
  • 8.42e3
  • 1.13e4
71.11
  • 71.11
  • 66.12
  • 54.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.58e3
  • 7.58e3
  • 7.76e3
  • 9.14e3
69.50
  • 69.50
  • 68.77
  • 63.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
55.01
  • 55.01
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
34.24
  • 34.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.74e4
  • 1.74e4
29.78
  • 29.78
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
25.85
  • 25.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000016758.

Paralogs (same species)

Cross-references

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