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P. troglodytes Gene: BTF3 - ENSPTRG00000016979 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000016979
NameBTF3
Descriptionbasic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
OrganismPan troglodytes (chimpanzee)
Synonym(s)btf3a, btf3b, nacb
Orthologs(s)29 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
265
  • 265
  • 268
  • 521
  • 550
98.94
  • 98.94
  • 98.93
  • 97.91
  • 97.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
310
  • 310
98.76
  • 98.76
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
317
  • 317
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
372
  • 372
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
403
  • 403
  • 597
  • 754
  • 898
98.38
  • 98.38
  • 97.60
  • 96.97
  • 96.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
432
  • 432
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
436
  • 436
98.25
  • 98.25
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
476
  • 476
  • 558
  • 932
98.09
  • 98.09
  • 97.76
  • 96.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
477
  • 477
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
478
  • 478
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
485
  • 485
  • 1.01e3
98.05
  • 98.05
  • 95.94
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
489
  • 489
  • 532
  • 578
  • 594
  • 811
98.03
  • 98.03
  • 97.86
  • 97.68
  • 97.61
  • 96.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
491
  • 491
98.03
  • 98.03
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
509
  • 509
  • 602
  • 616
  • 640
  • 695
  • 845
97.96
  • 97.96
  • 97.58
  • 97.52
  • 97.43
  • 97.21
  • 96.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
509
  • 509
  • 876
97.95
  • 97.95
  • 96.48
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
515
  • 515
97.93
  • 97.93
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
584
  • 584
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
599
  • 599
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
627
  • 627
  • 631
  • 746
97.48
  • 97.48
  • 97.46
  • 97.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
651
  • 651
  • 783
97.38
  • 97.38
  • 96.85
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
735
  • 735
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
754
  • 754
96.97
  • 96.97
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
778
  • 778
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
779
  • 779
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.17e3
  • 1.17e3
95.28
  • 95.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species5 genesCompare expression
Euarchontoglires7 species10 genesCompare expression
Boreoeutheria12 species15 genesCompare expression
Theria13 species16 genesCompare expression
Mammalia14 species17 genesCompare expression
Amniota16 species20 genesCompare expression
Tetrapoda17 species21 genesCompare expression
Euteleostomi18 species22 genesCompare expression
Bilateria25 species29 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000016979.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000016979.

Cross-references

EnsemblENSPTRG00000016979 (BTF3)
HGNCHGNC:1125 (BTF3)
EMBLAACZ03041146, GABF01009303
Uniprot/SPTREMBLH2QR25, H2QR25_PANTR

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