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P. troglodytes Gene: UBE2B - ENSPTRG00000017240 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000017240
NameUBE2B
Descriptionubiquitin conjugating enzyme E2B [Source:HGNC Symbol;Acc:HGNC:12473]
OrganismPan troglodytes (chimpanzee)
Synonym(s)hhr6b, rad6b, ubc2
Orthologs(s)13 orthologs
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
593
  • 593
  • 1.31e3
  • 1.48e3
  • 1.87e3
97.62
  • 97.62
  • 94.72
  • 94.06
  • 92.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
756
  • 756
96.96
  • 96.96
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
880
  • 880
96.46
  • 96.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.47e3
  • 1.47e3
94.10
  • 94.10
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
  • 2.28e3
  • 2.41e3
  • 2.51e3
  • 2.73e3
93.62
  • 93.62
  • 90.84
  • 90.29
  • 89.89
  • 89.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
93.13
  • 93.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.88e3
  • 1.88e3
  • 2.07e3
  • 2.99e3
  • 3.89e3
92.45
  • 92.45
  • 91.68
  • 87.96
  • 84.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.96e3
  • 1.96e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.97e3
  • 1.97e3
92.07
  • 92.07
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
91.84
  • 91.84
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.08e3
  • 2.08e3
91.62
  • 91.62
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
2.15e3
  • 2.15e3
  • 2.53e3
  • 2.86e3
  • 2.91e3
  • 2.92e3
  • 4.23e3
91.37
  • 91.37
  • 89.83
  • 88.49
  • 88.30
  • 88.23
  • 82.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
2.15e3
  • 2.15e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
2.56e3
  • 2.56e3
  • 6.25e3
89.71
  • 89.71
  • 74.84
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.59e3
  • 2.59e3
89.59
  • 89.59
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.66e3
  • 2.66e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.66e3
  • 2.66e3
89.29
  • 89.29
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
88.73
  • 88.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.88e3
  • 2.88e3
  • 5.81e3
88.43
  • 88.43
  • 76.62
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.04e3
  • 3.04e3
  • 5.49e3
  • 5.56e3
87.76
  • 87.76
  • 77.92
  • 77.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.48e3
  • 3.48e3
  • 5.62e3
  • 6.07e3
86.01
  • 86.01
  • 77.40
  • 75.56
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
3.52e3
  • 3.52e3
85.84
  • 85.84
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
4.44e3
  • 4.44e3
82.12
  • 82.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires4 species4 genesCompare expression
Tetrapoda5 species6 genesCompare expression
Bilateria12 species13 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000017240.

Paralogs (same species)

Cross-references

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