P. troglodytes Gene: APOM - ENSPTRG00000017972 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000017972
NameAPOM
Descriptionapolipoprotein M [Source:HGNC Symbol;Acc:HGNC:13916]
OrganismPan troglodytes (chimpanzee)
Synonym(s)apom, g3a, ng20
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
417
  • 417
  • 670
  • 714
  • 1.54e3
98.33
  • 98.33
  • 97.30
  • 97.13
  • 93.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.05e3
  • 1.05e3
  • 1.69e3
95.76
  • 95.76
  • 93.20
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.26e3
  • 1.26e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
6.12e3
  • 6.12e3
  • 8.01e3
75.38
  • 75.38
  • 67.77
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
  • 1.10e4
  • 1.19e4
70.62
  • 70.62
  • 55.66
  • 52.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
7.56e3
  • 7.56e3
69.56
  • 69.56
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.61e3
  • 8.61e3
65.34
  • 65.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.42e3
  • 9.42e3
  • 9.63e3
  • 1.14e4
  • 1.29e4
62.10
  • 62.10
  • 61.23
  • 54.28
  • 48.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.50e3
  • 9.50e3
  • 1.03e4
  • 1.20e4
  • 1.20e4
  • 1.28e4
61.75
  • 61.75
  • 58.39
  • 51.89
  • 51.82
  • 48.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.09e4
  • 1.12e4
  • 1.20e4
  • 1.32e4
  • 1.47e4
58.28
  • 58.28
  • 56.15
  • 54.99
  • 51.54
  • 46.90
  • 40.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
57.56
  • 57.56
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
  • 1.26e4
  • 1.43e4
56.52
  • 56.52
  • 49.09
  • 42.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
55.81
  • 55.81
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
54.34
  • 54.34
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
52.62
  • 52.62
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
51.46
  • 51.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
44.63
  • 44.63
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
43.98
  • 43.98
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
42.87
  • 42.87
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
42.54
  • 42.54
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
42.14
  • 42.14
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
33.04
  • 33.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000017972.

Cross-references

EnsemblENSPTRG00000017972 (APOM)
HGNCHGNC:13916 (APOM)
EMBLAACZ03049281
Uniprot/SPTREMBLH2QSN2, H2QSN2_PANTR

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