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P. troglodytes Gene: GNMT - ENSPTRG00000018178 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000018178
NameGNMT
Descriptionglycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
97.8
  • 97.8
  • 186
  • 726
  • 1.21e3
99.61
  • 99.61
  • 99.25
  • 97.08
  • 95.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
5.98e3
  • 5.98e3
  • 7.58e3
  • 7.99e3
  • 8.57e3
  • 8.80e3
  • 9.75e3
75.94
  • 75.94
  • 69.49
  • 67.85
  • 65.49
  • 64.58
  • 60.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.99e3
  • 5.99e3
  • 9.83e3
  • 1.07e4
75.89
  • 75.89
  • 60.44
  • 56.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.85e3
  • 6.85e3
  • 6.99e3
  • 9.60e3
72.43
  • 72.43
  • 71.85
  • 61.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
  • 8.82e3
  • 9.13e3
  • 1.15e4
69.77
  • 69.77
  • 64.49
  • 63.26
  • 53.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
7.79e3
  • 7.79e3
68.63
  • 68.63
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
7.82e3
  • 7.82e3
  • 7.85e3
  • 8.31e3
  • 8.56e3
  • 9.50e3
68.53
  • 68.53
  • 68.42
  • 66.56
  • 65.54
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
7.95e3
  • 7.95e3
67.98
  • 67.98
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
8.36e3
  • 8.36e3
66.36
  • 66.36
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.44e3
  • 8.44e3
  • 1.42e4
66.03
  • 66.03
  • 42.97
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
8.61e3
  • 8.61e3
65.34
  • 65.34
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
9.33e3
  • 9.33e3
62.45
  • 62.45
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
55.80
  • 55.80
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
53.21
  • 53.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
51.01
  • 51.01
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
50.15
  • 50.15
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
47.27
  • 47.27
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
44.46
  • 44.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
  • 1.43e4
44.16
  • 44.16
  • 42.62
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
42.58
  • 42.58
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
40.79
  • 40.79
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.49
  • 39.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Mammalia13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Euteleostomi16 species17 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000018178.

Cross-references

EnsemblENSPTRG00000018178 (GNMT)
HGNCHGNC:4415 (GNMT)
EMBLAACZ03050062
Uniprot/SPTREMBLH2QT12, H2QT12_PANTR

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