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P. troglodytes Gene: EFCAB10 - ENSPTRG00000019567 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000019567
NameEFCAB10
DescriptionEF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
2.03e3
  • 2.03e3
  • 2.08e3
91.83
  • 91.83
  • 91.62
AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
9.38e3
  • 9.38e3
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
  • 1.19e4
  • 1.26e4
  • 1.29e4
  • 1.31e4
  • 1.37e4
54.93
  • 54.93
  • 52.10
  • 49.39
  • 47.96
  • 47.26
  • 44.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
52.03
  • 52.03
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.25e4
  • 1.30e4
  • 1.30e4
  • 1.52e4
51.28
  • 51.28
  • 49.65
  • 47.82
  • 47.65
  • 38.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.62
  • 50.62
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
50.40
  • 50.40
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.31e4
  • 1.60e4
49.30
  • 49.30
  • 47.34
  • 35.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
49.07
  • 49.07
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
48.38
  • 48.38
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
47.98
  • 47.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.40e4
  • 1.49e4
  • 1.50e4
47.30
  • 47.30
  • 43.74
  • 40.09
  • 39.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.45e4
  • 1.45e4
46.87
  • 46.87
  • 41.79
  • 41.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
46.53
  • 46.53
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
43.45
  • 43.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 2.00e4
41.24
  • 41.24
  • 19.57
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
41.17
  • 41.17
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
38.89
  • 38.89
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
35.74
  • 35.74
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.66e4
  • 1.66e4
33.36
  • 33.36
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
28.54
  • 28.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000019567.

Cross-references

EnsemblENSPTRG00000019567 (EFCAB10)
HGNCHGNC:34531 (EFCAB10)
EMBLAC188705
Uniprot/SPTREMBLH2QV74, H2QV74_PANTR

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