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P. troglodytes Gene: RBPMS - ENSPTRG00000020135 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000020135
NameRBPMS
DescriptionRNA binding protein with multiple splicing [Source:HGNC Symbol;Acc:HGNC:19097]
OrganismPan troglodytes (chimpanzee)
Synonym(s)hermes
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
650
  • 650
  • 1.03e3
  • 1.12e3
  • 1.92e3
97.39
  • 97.39
  • 95.85
  • 95.49
  • 92.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
687
  • 687
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
  • 2.65e3
95.18
  • 95.18
  • 89.32
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.40e3
  • 1.40e3
94.36
  • 94.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
2.28e3
  • 2.28e3
  • 2.55e3
  • 3.01e3
  • 5.41e3
90.83
  • 90.83
  • 89.74
  • 87.89
  • 78.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.43e3
  • 2.43e3
90.23
  • 90.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
3.11e3
  • 3.11e3
87.47
  • 87.47
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
86.39
  • 86.39
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
5.44e3
  • 5.44e3
78.09
  • 78.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
5.96e3
  • 5.96e3
  • 7.84e3
76.02
  • 76.02
  • 68.44
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
73.09
  • 73.09
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
9.07e3
  • 9.07e3
63.47
  • 63.47
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
60.39
  • 60.39
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
56.69
  • 56.69
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.21e4
  • 1.22e4
  • 1.22e4
54.93
  • 54.93
  • 53.90
  • 51.15
  • 50.97
  • 50.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.22e4
  • 1.23e4
  • 1.25e4
  • 1.35e4
54.73
  • 54.73
  • 53.59
  • 50.90
  • 50.36
  • 49.59
  • 45.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
53.86
  • 53.86
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
52.28
  • 52.28
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.20e4
  • 1.20e4
  • 1.24e4
  • 1.29e4
51.52
  • 51.52
  • 50.23
  • 48.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.56
  • 49.56
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
  • 1.36e4
  • 1.46e4
48.59
  • 48.59
  • 45.30
  • 41.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
43.81
  • 43.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae1 species1 geneCompare expression
Catarrhini2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000020135.

Cross-references

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