P. troglodytes Gene: RC3H2 - ENSPTRG00000021339 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000021339
NameRC3H2
Descriptionring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
OrganismPan troglodytes (chimpanzee)
Synonym(s)flj20301, flj20713, mnab, rnf164
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.32e3
  • 2.32e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
2.66e3
  • 2.66e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
2.86e3
  • 2.86e3
88.48
  • 88.48
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.90e3
  • 2.90e3
88.34
  • 88.34
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
3.67e3
  • 3.67e3
85.22
  • 85.22
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.89e3
  • 3.89e3
  • 9.16e3
84.35
  • 84.35
  • 63.15
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
3.92e3
  • 3.92e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
3.93e3
  • 3.93e3
84.18
  • 84.18
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
3.94e3
  • 3.94e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.08e3
  • 4.08e3
83.60
  • 83.60
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.31e3
  • 4.31e3
  • 4.87e3
  • 5.91e3
82.66
  • 82.66
  • 80.41
  • 76.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
5.02e3
  • 5.02e3
  • 5.55e3
  • 7.88e3
  • 9.94e3
79.79
  • 79.79
  • 77.68
  • 68.30
  • 59.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
78.55
  • 78.55
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.48e3
  • 5.48e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
5.80e3
  • 5.80e3
76.67
  • 76.67
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.91e3
  • 5.91e3
  • 8.70e3
  • 9.07e3
76.21
  • 76.21
  • 64.99
  • 63.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
6.47e3
  • 6.47e3
  • 1.02e4
  • 1.04e4
  • 1.08e4
  • 1.20e4
73.95
  • 73.95
  • 58.94
  • 58.19
  • 56.65
  • 51.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.82e3
  • 6.82e3
  • 7.98e3
72.53
  • 72.53
  • 67.90
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
6.83e3
  • 6.83e3
  • 7.60e3
  • 9.49e3
  • 9.81e3
  • 1.04e4
  • 1.15e4
72.50
  • 72.50
  • 69.40
  • 61.79
  • 60.49
  • 58.29
  • 53.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
6.90e3
  • 6.90e3
72.24
  • 72.24
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
70.23
  • 70.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
7.69e3
  • 7.69e3
  • 8.81e3
  • 9.84e3
  • 1.04e4
69.04
  • 69.04
  • 64.53
  • 60.39
  • 58.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
8.40e3
  • 8.40e3
  • 9.38e3
66.20
  • 66.20
  • 62.24
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.82e3
  • 8.82e3
64.51
  • 64.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000021339.

Cross-references

EnsemblENSPTRG00000021339 (RC3H2)
HGNCHGNC:21461 (RC3H2)
EMBLAACZ03069381, AACZ03069382, AACZ03069383, AACZ03069384, AACZ03069385, AACZ03069386, GABC01006253, GABD01003973, GABE01001568, GABF01004991
Uniprot/SPTREMBLH2QXU7, H2QXU7_PANTR

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