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P. troglodytes Gene: LRSAM1 - ENSPTRG00000021390 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000021390
NameLRSAM1
Descriptionleucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
OrganismPan troglodytes (chimpanzee)
Synonym(s)cmt2p, flj31641
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
86.88
  • 86.88
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
3.42e3
  • 3.42e3
  • 4.33e3
  • 4.36e3
86.24
  • 86.24
  • 82.55
  • 82.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.49e3
  • 3.49e3
  • 3.96e3
  • 3.97e3
  • 4.10e3
  • 5.12e3
85.94
  • 85.94
  • 84.07
  • 84.01
  • 83.51
  • 79.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.66e3
  • 3.66e3
  • 4.21e3
  • 4.38e3
  • 4.51e3
  • 5.20e3
  • 6.06e3
85.28
  • 85.28
  • 83.04
  • 82.39
  • 81.84
  • 79.07
  • 75.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
  • 5.00e3
  • 6.02e3
84.84
  • 84.84
  • 79.87
  • 75.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.11e3
  • 4.11e3
  • 6.82e3
  • 7.04e3
  • 7.83e3
83.46
  • 83.46
  • 72.55
  • 71.68
  • 68.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
4.51e3
  • 4.51e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.50e3
  • 5.50e3
77.88
  • 77.88
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
5.59e3
  • 5.59e3
77.50
  • 77.50
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
6.62e3
  • 6.62e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.86e3
  • 6.86e3
  • 6.98e3
  • 7.18e3
  • 7.62e3
72.39
  • 72.39
  • 71.89
  • 71.09
  • 69.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
7.00e3
  • 7.00e3
71.80
  • 71.80
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.63e3
  • 7.63e3
  • 9.60e3
69.31
  • 69.31
  • 61.34
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
8.42e3
  • 8.42e3
66.10
  • 66.10
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.61e3
  • 8.61e3
65.33
  • 65.33
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
8.78e3
  • 8.78e3
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
61.03
  • 61.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
9.88e3
  • 9.88e3
60.22
  • 60.22
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
9.98e3
  • 9.98e3
59.82
  • 59.82
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
59.66
  • 59.66
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
58.79
  • 58.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.34e4
57.81
  • 57.81
  • 45.94
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
48.05
  • 48.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000021390.

Cross-references

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